Guide to filtering and subsetting single-cell anndata and pandas objects | basic and advanced Published 2022-07-18 Download video MP4 360p Recommendations 06:40 Simple guide to GSEA and plotting in python 1:18:40 Complete single-cell RNAseq analysis walkthrough | Advanced introduction 04:36 Convert h5ad anndata to a Seurat single-cell R object 09:59 Pseudobulk single-cell analysis in Python with Scanpy and pyDeseq2 15:14 Applying random forest classifiers to single-cell RNAseq data 20:13 Single cell analysis in python with Scanpy 20:09 Comparing single-cell RNA integration methods | Which is the best? 05:59 Single-cell gene co-expression | single-cell RNAseq methods 17:51 Can chatGPT do single-cell bioinformatic analysis? 1:00:27 Complete Python Pandas Data Science Tutorial! (Reading CSV/Excel files, Sorting, Filtering, Groupby) 33:38 Find markers and cluster identification in single-cell RNA-Seq using Seurat | Workflow tutorial 23:50 How to do single-cell RNA velocity analysis | Complete introduction 13:55 Single-cell background decontamination in R and Python with SoupX 54:02 Single-cell data analysis with Scanpy and scvi-tools 16:19 Differential expression in Python with pyDESeq2 16:24 Single-cell trajectory and pseudotime analysis with Monocle3 and Seurat in R 08:58 Label single-cells automatically in python | scVI label transfer 33:56 Integrate single-cell RNA-Seq datasets in R using Seurat (CCA) | Detailed Seurat Workflow Tutorial 12:09 Transcription factor regulatory activity in single cell transcriptomics Similar videos 37:12 Single Cell data analysis tutorial on PBMC dataset using scanpy - Part1 16:46 Reading single-cell data in R: H5AD, loom, MEX, AnnData formats | Bioinformatics for beginners 11:53 Single-cell gene set activity with AUCell 07:21 Single-cell integration in python with scanpy 07:42 Scanpy Video Tutorials--Video 3: Subset Cell Clusters 14:02 Seurat Scanpy Video Tutorials: Convert Seurat Objects into H5AD Files More results